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Paolo Cremaschi




supports Dr. Cremaschi PhD program

 

IGM-CNR, Via Abbiategrasso, 207 - 27100 Pavia, Italy

tel: +39-0382-546362

fax: +39-0382-422286 

E-mail: cremaschiigm.cnr.it

 

 

 

 

 

Curriculum Vitae

  

RS Research & Development, systems analyst and developer (1996)

 

I.T.I. Information Technology Italy, senior developer (2000)

 

ZeroUno informatica, consultant (2001)

 

everis, consultant (2010)

 

everis, senior consultant in the industry division (2011)

 

Master’s degree in Biological Sciences, University of Pavia, Italy (2012)

 

Research fellow at the Institute of Molecular Genetics-CNR, Pavia, Italy (2012)

 

PhD student in Genetics, Molecular and Cellular Biology, University of Pavia, Italy (since 2012)

 

 

Reserch activities

I'm doing a PhD in the computational biology laboratory of the Institute of Molecular Genetics IGM - CNR under the supervision of Dr. Silvia Bione.

My research activities is on the integration of data resulting from various "omics technologies". In particular, I work on the analysis of data from high-throughput experiment through the development of "machine learning" and "data mining" algorithms.

Currently my activity concerns the development of a bioinformatic tool for the co-expression analysis for the identification of functional pathways. We plan to make this tool available in the local CNR network as a first step and, as final target, publicly available in Internet.

 

The development of this tool include:

  • development of an ETL process (Extract Transform and Load)
  • development of a structured database 
  • creation and optimization of an algorithm for data analysis
  • development of a web interface for public access to the instrument
  • process optimization through the process parallelization

As part of this project I am collaborating with the Institute of Applied Mathematics and Information Technologies IMATI - CNR in order to implement the algorithm for the analysis of co-expression in languages that make it possible to take full advantage of architectures for parallel computing (Fortran and C + + ).

 

 

Abstracts 

Cremaschi P, Rovida S, Sacchi L, Lisa A, Montecucco A, Biamonti G, Bione S, Sacchi G – 2012 Inside complex disorder pathways through gene expression analysis (oral comunication)

ATTI Convegno Intelligence Data Analysis in Biomedicine and Pharmacology IDAMAP Pavia (PV) in stampa

 

Cremaschi P, Rovida S, Sacchi L, Lisa A, Montecucco A, Biamonti G, Bione S, Sacchi G – 2012 CorrelaGenes: a new tool for the interpretation of the human transcriptome (poster)

ATTI Convegno NETTAB Como (CO) in stampa

 

R. Rossi, E. Savini, P. Cremaschi, F. Weighardt, G. Biamonti, G. Ciarrocchi e A. Montecucco - 1995 Dissezione funzionale della DNA ligasi I di mammifero: identificazione dei segnali coinvolti nella localizzazione nucleare e subnucleare della proteina (oral comunication)

ATTI Convegno Congiunto ABCD-AGI-SIBBM-SIMGBM, Montesilvano Lido (PE), 5.25, pag. 91.

 


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